Google
More docs on the ARB website.
See also index of helppages.
Last update on 25. Nov 2018 .
Main topics:
Related topics:

Dot potentially missing bases

OCCURRENCE

ARB_EDIT4/Edit/Dot potentially missing bases

 

DESCRIPTION

This function changes all gaps ('-') where bases are possibly missing into dots ('.').

It applies to all (or all marked) sequences of one group. The cursor has to be placed on the consensus of the group.

In columns where the group consensus shows an uppercase base, all gaps get replaced by dots.

Additionally an SAI can be used to restrict the affected columns:

  • Select the wanted SAI
  • Edit characters that shall be used to select a column.

Click on the 'Consensus' button to change the way how the consensus is calculated (see also '´Consensus definition´')

 

NOTES

None

 

EXAMPLES

None

 

WARNINGS

None

 

BUGS

No bugs known