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Last update on 04. Mar 2022 .
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    Track alignment changes

    OCCURRENCE  

    ARB_NT/Sequences/Track alignment changes

     

    DESCRIPTION  

    When called first, a checksum entry is generated for all species with data in the selected alignment. For alignment 'ali_16s' this entry is named 'checksum_ali_16s'.

    When called again later, the stored checksums are compared with the current checksums. If a checksum change is detected, an entry describing the change is stored in the field 'seq_history'.

     

    NOTES  

    The first checksum in the 'checksum_xxx'-entries is calculated with gaps ignored (i.e. it reflects changes to the sequence data), the second checksum is calculate using gaps (i.e. it reflects changes to the alignment of the sequence).

     

    EXAMPLES  

    None

     

    WARNINGS  

    None

     

    BUGS  

    No bugs known