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Last update on 12. Oct 2021 .
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Visualize SAIs at probe match targets.

OCCURRENCE  

ARB_NT/Probes/Match Probes/Match SAI

 

DESCRIPTION  

This window aides the visualization of SAIs (sequence associated information) of the potential probe targets that were designed (see ´Probe Design´) and matched (see ´Probe Match´).

Steps to be followed to VISUALIZE SAIs for the Potential Probe Targets:

  1. Select SAI to be visualized from the Select SAI Menu. (Properties/Select SAI)
  2. Define desired background colors (COLOR 0 to COLOR 9) to be used to indicate the CHARACTERS/DIGITS (occurring in the selected SAI). These colors will be painted as background of the Probe target list. (configure via Properties/Define Color Translations)
  3. Values or characters contained in the SAIs selected can also be displayed below each Probe Targets by selecting the 'DISPLAY SAI' check box in 'Color Translation Table' window.
  4. Once the desired SAI is selected and the respective color translation is defined, the SAI is painted as the background of the probe targets in the defined color ranges with respect to SAIs.

One can change the COLOR RANGE by going to 'Properties/Set Colors and Fonts' menu.

 

NOTES  

Color translation definitions defined for various SAIs can be saved by clicking the config manager button in the DEFINE COLOR TRANSLATION window.

To save the color translation definitions permanently, you need to save properties afterwards (from ARB main window / Properties).

 

EXAMPLES  

None

 

WARNINGS  

None

 

BUGS  

No bugs known